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FAMILY TREE DNA TUTORIAL

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DNA is the carrier of our genetic information, and is passed down from generation to generation. All of the cells in our bodies, except red blood cells, contain a copy of our DNA.

At conception, a person receives DNA from both the father and mother. We each have 23 pairs of chromosomes. Of each pair, one was received from the father and one was received from the mother. These 23 pairs of chromosomes are known as nuclear DNA because they reside in the nucleus of every cell (except red blood cells).

The 23rd chromosome is known as the sex chromosome. As with the other chromosomes, one is inherited from the father, and one from the mother. The 23rd chromosome from the mother is always an X. From the father, a person either inherits an X chromosome or a Y chromosome. The chromosome inherited from the father determines their gender. An X from the father would result in an XX combination, which is a female, and a Y from the father would result in an XY combination, which is a male.

      

We also inherit our mitochondrial DNA (mtDNA) from our mother, and none from our father. mtDNA is located outside the nucleus of the cell.



DNA is made up of four bases: adenine (A), cytosine (C), thymine (T), and guanine (G). The order of these bases is called the DNA sequence.



Whenever a particular base is present on one side, its complementary base is found on the other side. In the example above, see how the bases always occur in complementary pairs. Guanine (green) always pairs with cytosine (red) and thymine (yellow) always pairs with adenine (blue). So we can write the DNA sequence by listing the bases along either one of the two sides. In the example shown, one side reads:

T G T T C G T C etc.

For Genetic Genealogy, which is the application of DNA testing to genealogy research, two types of DNA can provide information useful in conjunction with genealogy research. These two types are the Y chromosome and mtDNA. The areas that we test are found in the so-called “Junk DNA” of the Y chromosome and mtDNA because it is found between the genes.

Y DNA
The Y chromosome is transmitted from father to son. Testing the Y chromosome provides information about the direct male line, meaning the father to his father and so on. The locations tested on the Y chromosome are called markers. Occasionally a mutation occurs at one of the markers in the Y chromosome. Mutations are simply small changes in the DNA sequence. They are natural occurrences and take place at random intervals. Overall, they are estimated to occur once every 500 generations per marker. Mutations can sometimes be valuable in identifying branches of a family tree.

Each marker has a name assigned to it by the scientific community, such as DYS#391, DYS#439 or GATA H4. The scientists classify these markers as Short Tandem Repeats (STR) because at each of these marker locations a short DNA code repeats itself. The result for a marker is the number of times the code repeats at that location and is called the allele value.

The result received for a Y-DNA test is a string of allele values called a “haplotype.” Here is an example of a 25-marker haplotype:

PANEL 1
LOCUS
1
2
3
4
5
6
7
8
9
10
11
12
DYS#
393
390
19
391
385a
385b
426
388
439
389-1
392
389-2
ALLELES
12
24
14
10
11
15
12
12
12
13
13
29


 

 

 

PANEL 2
LOCUS
13
14
15
16
17
18
19
20
21
22
23
24
25
DYS#
458
459a
459b
455
454
447
437*
448
449
464a**
464b**
464c**
464d**
ALLELES
17
9
10
11
12
24
15
19
28
15
16
17
17


 

 

 

*Also known as DYS 394
**
On 5/19/2003, these values were adjusted down by 1 point due to a change in Lab nomenclature.

Family Tree DNA offers 5 Y chromosome tests:

12-Marker
37-Marker
67-Marker
Backbone Haplogroup
Deep-SNP Test


First 12 Markers Additional 25 

(to 37 markers)

Additional 30**

(to 67 markers)

Locus DYS#
1 393
2 390
3 19*
4 391
5 385a
6 385b
7 426
8 388
9 439
10 389-1
11 392
12 389-2
Locus DYS#
13 458
14 459a
15 459b
16 455
17 454
18 447
19 437
20 448
21 449
22 464a
23 464b
24 464c
25 464d
26 460
27 GATA H4
28 YCA II a
29 YCA II b
30 456
31 607
32 576
33 570
34 CDY a
35 CDY b
36 442
37 438
Locus DYS#
38 531
39 578
40 395S1a
41 395S1b
42 590
43 537
44 641
45 472
46 406S1
47 511
48 425
49 413a
50 413b
51 557
52 594
53 436
54 490
55 534
56 450
57 444
58 481
59 520
60 446
61 617
62 568
63 487
64 572
65 640
66 492
67 565
*Also known as DYS 394
** The 29 markers on this third panel have mutation rates that have yet to be determined.

The markers in red have been observed to have a faster-than-average mutation rate, and therefore these markers are very helpful at splitting lineages into subsets or branches within your family tree.

Surname Project
A Surname Project is a project which is established to test and compare those with a common surname and variants. A Surname Project has a leader known as the Group Administrator. This person assists the members with understanding their results, typically interprets the results for the group, and may publish this information in a newsletter or web site.

There are a wide variety of applications for Y-DNA testing. Y-DNA testing can be used to confirm the paper genealogical research for your family tree. It can determine which family trees with the same or variant surnames are related, and can provide clues to help you with your genealogy research. These are just a few of the applications for Y-DNA testing.

Since the Y chromosome is only found in men, those who take the Y-DNA test must be males. For females who are interested in the Y-DNA result for their surname or family tree, a close male relative with that surname would need to provide the sample.

Y-DNA Haplogroups
Using the results of a Y-DNA marker test, Family Tree DNA estimates the tester’s haplogroup. The haplogroup identifies the person's major population group and provides information about the ancient origin of the male line. Family Tree DNA also offers a haplogroup test which participants can use to confirm their haplogroup assignment. The “Backbone” haplogroup test confirms the base haplogroup assignment, and the “Deep Clade” haplogroup test identifies the branch of the haplogroup the person belongs to.



mtDNA
mtDNA is passed from mother to child. Since only females pass on their mtDNA, testing the mtDNA tells about the mother, to her mother, and so on along the direct maternal line. Both males and females receive mtDNA from their mothers, so both men and women can test their mtDNA.

While mutations occur in mtDNA, the rate of mutation is relatively slow. Over thousands of years these mutations build up so that one female line will have a sequence distinguishable from another. As people spread throughout the world, mutations occasionally occurred in different populations over time. This allows us to test the mtDNA to identify the world origin of a person’s lineage.

mtDNA is tested and the result is compared to a reference sequence called the Cambridge Reference Sequence (CRS). By comparing an mtDNA sequence to the CRS, we can identify the ancient lineage to which you belong, called the haplogroup. Many haplogroups are continent-specific and some of their branches are region-specific.

mtDNA Haplogroups
Haplogroups are labeled alphabetically. Today, anthropologists have identified certain haplogroups that originated in Africa, Europe, Asia, the islands of the Pacific, the Americas, and sometimes particular ethnic groups. Of course, haplogroups that are specific to one region are sometimes found in another, but this is due to more recent migration.

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